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Viruses can be classified in several ways, such as by their geometry, by whether they have envelopes, by the identity of the host organism they can infect, by mode of transmission, or by the type of disease they cause. The most useful classification is probably by the type of nucleic acid the virus contains and its mode of expression. This classification was proposed by Nobel-prize winner David Baltimore. It should be noted that none of these classifications are expected to be phylogenetic, as viruses may not share a common origin.
1 Overview
The various forms of viruses arise because one of the two strands of DNA in which all cellular life forms store their genetic information is redundant, so that viruses can have either single-stranded or double-stranded genomes. Furthermore, some viruses store their genome in RNA rather than in DNA form. RNA arises in cells as an intermediate when genes are translated into proteins. RNA genomes of viruses can be encoded in two different directions: Either the genes are stored in the 5'->3' direction (positive or + polarity), analogous to the direction in which genes are represented in mRNA in cells, or the genes are stored in the opposite direction (negative or - polarity).
The taxonomy of viruses is similar to that of all other forms of life:
- Class (determined by genome type and mode of expression)
- Order (...virales)
- Family (...viridae)
- Subfamily (...virinae)
- Genus (...virus)
- SpeciesThis article discusses biological species. Also see combinatorial species for the mathematical meaning of the term. Species is also a movie by Roger Donaldson. In English "species" is both singular and plural. The word " specie" is unrelated and is used t ( virus)
The division of classes into orders is very recent. To date, only 3 orders have been named, and many families have not yet been classified into orders. Approximately 80 families and 4000 species of virus are known.
2 Classification by genome type
2.1 DNA viruses
2.1.1 dsDNA viruses (double stranded DNA)
- Order Caudovirales ( bacteriophages).
- Family Myoviridae
- Genus T4-like viruses ; type species: Enterobacteria phage T4Enterobacteria phage T4 is a phage that infects E. coli bacteria. Its DNA is 169-170 kb long, one of the longest DNAs in phages. The lifecycle (from entering a bacteria to its destruction) takes about 30 minutes (at 37 ° C) and contains of: adsorption and
- Genus P1-like viruses ; type species: Enterobacteria phage P1
- Genus P2-like viruses ; type species: Enterobacteria phage P2
- Genus Mu-like viruses ; type species: Enterobacteria phage Mu
- Genus SPO1-like viruses ; type species: Bacillus phage SPO1
- Genus φH-like viruses ; type species: Halobacterium virus φH
- Family Podoviridae
- Genus T7-like viruses ; type species: Enterobacteria phage T7
- Genus φ29-like viruses ; type species: Bacillus phage φ29
- Genus P22-like viruses ; type species: Enterobacteria phage P22
- Family Siphoviridaelambda;-like viruses T1-like viruses T5-like viruses c2-like viruses L5-like viruses ψM1-like viruses Siphoviridae is a family of double-stranded DNA viruses infecting only bacteria that are caracterized by a long non-contractile tail and an isometric
- Genus λ-like viruses ; type species: Enterobacteria phage λ
- Genus T1-like viruses ; type species: Enterobacteria phage T1
- Genus T5-like viruses ; type species: Enterobacteria phage T5
- Genus c2-like viruses ; type species: Lactococcus phage c2
- Genus L5-like viruses ; type species: Mycobacterium phage L5
- Genus ψM1-like viruses ; type species: Methanobacterium ψM1
- Unassigned families:
- Family AdenoviridaeMastadenovirus Aviadenovirus Atadenovirus Siadenovirus Adenoviruses are viruses of the family Adenoviridae . They infect both humans and animals. Adenoviruses were first isolated in human adenoids, from which the name is derived. Adenoviruses are medium-s
- Genus Mastadenovirus ; type species: Human adenovirus C
- Genus Aviadenovirus ; type species: Fowl adenovirus A
- Genus Atadenovirus ; type species: Ovine adenovirus D
- Genus Siadenovirus ; type species: Turkey adenovirus B
- Family HerpesviridaeSubfamily Alphaherpesvirinae Simplexvirus Varicellovirus Mardivirus Iltovirus Subfamily Betaherpesvirinae Cytomegalovirus Muromegalovirus Roseolovirus Subfamily Gammaherpesvirinae Lymphocryptovirus Rhadinovirus Unassigned subfamily: Ictalurivirus Herpesvi
- Subfamily Alphaherpesvirinae
- Subfamily Betaherpesvirinae
- Subfamily Gammaherpesvirinae
- Unassigned subfamily:
- Ictalurivirus ; type species: Ictalurid herpesvirus 1
- Family Papillomaviridae
- Family Polyomaviridae
- Genus Polyomavirus; type species: Simian virus 40
- Genus Pomovirus ; type species: Potato mop-top virus
- Genus Potexvirus ; type species: Potato virus X
- Family Poxviridae
- Subfamily Chordopoxvirinae
- Genus Orthopoxvirus ; type species: Vaccinia virus; diseases: cowpox, vaccinia, smallpox
- Genus Parapoxvirus ; type species: Orf virus
- Genus Avipoxvirus ; type species: Fowlpox virus
- Genus Capripoxvirus ; type species: Sheeppox virus
- Genus Leporipoxvirus ; type species: Myxoma virus
- Genus Suipoxvirus ; type species: Swinepox virus
- Genus Molluscipoxvirus ; type species: Molluscum contagiosum virus
- Genus Yatapoxvirus ; type species: Yaba monkey tumor virus
- Subfamily Entomopoxvirinae
- Genus Entomopoxvirus A ; type species: Melolontha melolontha entomopoxvirus
- Genus Entomopoxvirus B ; type species: Amsacta moorei entomopoxvirus
- Genus Entomopoxvirus C ; type species: Chironomus luridus entomopoxvirus
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